IGVFFI0407QZNJ

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI0407QZNJ/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI0407QZNJ",
    "aliases": [
        "jesse-engreitz:230523pPPIFEnformer-THP1-Amp_PPIF_promoter-BioRep2-FFrep4-BinC-PCRrep12_R1"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI0407QZNJ](/sequence-files/IGVFFI0407QZNJ/) has in progress subobject auxiliary set [IGVFDS8308NVXH](/auxiliary-sets/IGVFDS8308NVXH/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI0407QZNJ/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "1f45554eed47a26d672f9da0cdd85563",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-13T09:23:44.239971+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS8308NVXH/",
    "file_size": 8361994,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI0407QZNJ/@@download/IGVFFI0407QZNJ.fastq.gz",
    "illumina_read_type": "R1",
    "index": "GCCGCAAC:TGAC",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 150,
    "md5sum": "a98fdb3305027f56cd9cdc8e7a384e4b",
    "mean_read_length": 150,
    "minimum_read_length": 150,
    "read_count": 223304,
    "release_timestamp": "2023-12-21T00:40:42.451933+00:00",
    "s3_uri": "s3://igvf-files/2023/12/13/b02c8a32-12ae-48e9-901a-75bd8ed9e901/IGVFFI0407QZNJ.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "230523pPPIFEnformerTHP1-THP1-PE-pPPIF_Enformer-Amp-pPPIF-BioRep2-FFRep4_BinC-PCRrep12_S372_R1_001.fastq.gz",
    "summary": "R1 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "b02c8a32-12ae-48e9-901a-75bd8ed9e901"
}