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IGVFFI0384CUYL

released
validated
File Set
IGVFDS3069YZFY(lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp15_multi_10x2_NGS1_i1
md5sum
7c43602b335606ff79aa36627b959bde
Content MD5sum
b4e93b2271c04c162aea1a6ee1b6121b
File Size
134 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/igvf15/MULTI/CMAS17_MULTI2_S5_L001_I1_001.fastq.gz
Checkfiles Version
v14

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
22NCFCLT3
Lane
1
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I1
Average Read Length
10
Read Count
18460316

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: GM25256 (WTC-11) differentiated cell specimen induced to liver for 18 days, male, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to liver for 13 days, male, Homo sapiens; ... and 10 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
cell hashing barcodes
cell hashing barcodes
Ansuman Satpathy, Stanford
919 KB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI6339LORA, IGVFFI7931LQSS, IGVFFI0384CUYL, IGVFFI0978XAEL
Ansuman Satpathy, Stanford
1.3 KB
validated

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford