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IGVFFI0371QDGZ

released
validated
File Set
IGVFDS2721AQQO(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 175
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_175_R2
buenrostro-bernstein:SS-LS_175_R2
md5sum
1c2c130fceddb4838cf7b624145f52a6
Content MD5sum
9916ed5db5063f70b4d95c67ecfc68c3
File Size
10 GB
Submitted File Name
gs://fc-7b87fd5f-6af3-4823-befa-ac5875469fa1/BMMC_single_donor_ATAC_L002_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
175
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
240054472

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 212), Homo sapiens

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI3567OWKU, IGVFFI0371QDGZ
Jason Buenrostro, Broad
1.2 KB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad