IGVFFI0371IZXG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2689NPPZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G8_P056_L003_I2

md5sum

772510540bf73d0eabd12cb2eee480c2

Content MD5sum

1b0416d354fec14554a670378f76be8f

File Size

403 MB

Submitted File Name

Multiome_RNA_RP007_G8_L008_P056_S36_L003_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

59188939

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0124BONK

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples