IGVFFI0368TSVG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1607VGTH(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X015_G7_P014_L002_I1

md5sum

00677e3fd47335597cec0c1155dc1242

Content MD5sum

f4f509d19f53ec9c90547353f5cc73a7

File Size

1.5 GB

Submitted File Name

Multiome_RNA_X015_G7_L007_P014_S27_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HTHCCDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

259824188

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5630CGRI

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) posterior cingulate gyrus tissue; Homo sapiens (male, 90 or above years) substantia nigra tissue; ... and 10 more samples