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IGVFFI0352ENLP

released
validated
File Set
IGVFDS6911ZLIV(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 177
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_177_R1
buenrostro-bernstein:SS-LS_177_R1
md5sum
85686cc45072cb0857ab79f545466129
Content MD5sum
7f3cd9939701db2d067e06b06447e74c
File Size
15 GB
Submitted File Name
gs://fc-7b87fd5f-6af3-4823-befa-ac5875469fa1/BMMC_single_donor_RNA_L002_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
177
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
679737296

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 212), Homo sapiens

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0352ENLP, IGVFFI7926BMKR
Jason Buenrostro, Broad
1.2 KB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad