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IGVFFI0351SDWZ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS2017QGND(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_RP007_G3_P055_L002_R1
md5sum
a16f1dec2f5156ae7905f50844a393ab
Content MD5sum
5213c13b39dd8771022d97a11f0819e9
File Size
1.9 GB
Submitted File Name
Multiome_ATAC_RP007_G3_L003_P055_S15_L002_R1_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
223JGVLT3
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
50
Read Count
63871094

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF