IGVFFI0350GGSB

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7626QFRS(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X014_G2_P012_L004_I2

md5sum

154a7803e997bbceee273b1f61f84229

Content MD5sum

cb7b69f29f6cce1eb9fb8c16deb2fb40

File Size

1.6 GB

Submitted File Name

Multiome_RNA_X014_G2_L002_P012_S28_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HJ7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

252490827

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6111OIGC

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples