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IGVFFI0336RPVF

released
validated
File Set
IGVFDS7425QRXB(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS17-18-prim-5K-ATAC.R1.fastq.gz
md5sum
65fbb0c067544a2b02cab3e3fc3c4e9b
Content MD5sum
0fcdd803943b70f6fa04570638bb4c76
File Size
1.8 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS17-18-prim-5K-ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS17-18-prim-5k_P1.03
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
89.92
Read Count
36054983

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0866MYPP, IGVFFI0336RPVF, IGVFFI9003FKDK
Jason Buenrostro, Broad
1.2 KB
validated