IGVFFI0323EZHE

released
validated
File Set
IGVFDS8492FFIO(CRISPR HiCAR integrating a guide (sgRNA) library targeting accessible genome regions in a genomic locus)
Summary
R2 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-crispra-region3-1umET1-ipsc-cm-targeted-hicar-rep3-R2
md5sum
0ac777132cea36ee659dcf38f51ddb29
Content MD5sum
e6ec8c95ee58404c7f16856ab9883c38
File Size
862 MB
Submitted File Name
/hpc/group/gersbachlab/tda17/IGVF_data_files/HiCAR/fastq/crispra_human/crispra_hicar_human_fastq/H_vp64_r2_TA448_3_1uMET1_ds.b989bff9f6d841e48a30dcb51cd558b6/H_vp64_r2_TA448_3_1uMET1_S10_L001_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
4
Sequencing Kit
NextSeq 1000/2000 P2 Reagent Kit
Illumina Read Type
R2
Average Read Length
100
Read Count
15135158

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens treated with 1 μM Endothelin-1 for 3 days, transfected with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
mcool
contact matrix
genomic position by genomic position in contact matrix
Charles Gersbach, Duke
29 MB
validated

Attribution