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SequenceFile
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IGVFFI0321KGVZ
IGVFFI0321KGVZ
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS2606ZOFX
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 202
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX14-SC4_snRNA_S1_R1
md5sum
adda1b2d13970f14af16bb48f25f8b9c
Content MD5sum
64dcfa7f5726147f0344d841d65e51d0
File Size
6.1 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX14-SC4/BH73JJDSX3_ICJY07/XHLT1-POOL-XX14-SC4-GEX_S3_L002_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
202
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
213461222
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9745CPOX
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (male, 24.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 52.0 years) peripheral blood mononuclear cell; ... and 18 more samples