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INDEXED
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SequenceFile
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IGVFFI0313KAYW
IGVFFI0313KAYW
released
validated
Json view
File Set
IGVFDS1872UZFL
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4254
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4254_R1
md5sum
afb8c4c22448886832e28af59d97304c
Content MD5sum
837cdbb7a855eeaefc84bbbd04f32dae
File Size
2.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-634_L8_SS-PKR-182_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4254
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
42278501
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4232UUYV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 182)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4769DVPZ
yaml
seqspec
seqspec of IGVFFI0313KAYW, IGVFFI2831EZKV, IGVFFI7631UEEP
Jason Buenrostro, Broad
1.3 KB
validated