IGVFFI0309XOGX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7128RFFJ(single-nucleus ATAC-seq (10x multiome))

Summary

R3 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP025_G1_P069_L003_R3

md5sum

c75ac249595475aa657a42f5fa5631e6

Content MD5sum

1c9f4a4c3e2362264775af6b6903a0e9

File Size

11 GB

Submitted File Name

Multiome_ATAC_RP025_G1_L001_P069_S1_L003_R3_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

150

Read Count

160341199

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7939CAGT

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 8 more samples