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INDEXED
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SequenceFile
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IGVFFI0309CZNF
IGVFFI0309CZNF
released
validated
Json view
File Set
IGVFDS8623UWKX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3845
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3845_R1
md5sum
fbd64d579c4c64f769f673399abfcc5f
Content MD5sum
4a182a2ab65645fb9b3ae91812b4afaa
File Size
543 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1536_L2_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3845
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
11107596
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5881EHHY
yaml
seqspec
seqspec of IGVFFI0309CZNF, IGVFFI2221EFRC
Jason Buenrostro, Broad
1.3 KB
validated