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IGVFFI0303RMUM
IGVFFI0303RMUM
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS2806EVXQ
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X040_G1_P042_L002_I2
md5sum
e6b59345044972c3009c90c5eb74b0e2
Content MD5sum
4aa0da1bc3b571905d52750ad2506695
File Size
389 MB
Submitted File Name
Multiome_RNA_X040_G1_L001_P042_S3_L002_I2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
222YMLLT3
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I2
Average Read Length
10
Read Count
72368710
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7243MOJZ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 83 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples