Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI0279UFOQ
IGVFFI0279UFOQ
released
validated
Json view
File Set
IGVFDS5417MWZF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8278
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8278_R1
md5sum
3153ccd58fe02cbfffca7f56173a4fe1
Content MD5sum
aa0d6d963b35491dcca2a8746f8e7d96
File Size
3.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2156_L2_SS-PKR-532_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8278
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
70105206
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9059OMXR
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 532)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8044WCRU
yaml
seqspec
seqspec of IGVFFI0279UFOQ, IGVFFI2096LEPL
Jason Buenrostro, Broad
1.3 KB
validated