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INDEXED
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SequenceFile
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IGVFFI0238LDZP
IGVFFI0238LDZP
released
validated
Json view
File Set
IGVFDS3355ZETN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9158
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9158_R1
md5sum
e7086ec2c216460bb9038d250c7fff04
Content MD5sum
3cc897f9237a429da1f09045a5f5867d
File Size
789 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2316_L8_SS-PKR-183_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9158
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
17599117
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3928OWEM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 183)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4024VGAE
yaml
seqspec
seqspec of IGVFFI0238LDZP, IGVFFI0067PVOT, IGVFFI1693NIXR
Jason Buenrostro, Broad
1.3 KB
validated