IGVFFI0233WMWK

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2695JODN(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP019_G3_P064_L001_I1

md5sum

36abe4929f3b717ee9b8d08af5619ef7

Content MD5sum

11258b94c3c6617b78d6952737c399ff

File Size

457 MB

Submitted File Name

Multiome_RNA_RP019_G3_L003_P064_S17_L001_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

79029348

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3886NYMH

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 72 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples