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IGVFFI0230VRMR

released
validated
File Set
IGVFDS5032LSER(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1710
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1710_R1
buenrostro-bernstein:SS-LS_1710_R1
md5sum
9d830005be8f794a2cc77b8cf86201bc
Content MD5sum
bbb4176cc515b3545e15e03f9f682d9d
File Size
1.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1111_L4_SS-PKR-4_SS-V2-PLATE2-3rd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1710
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
81388207

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (37 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad