{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI0222FTDC/",
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"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI0222FTDC",
"aliases": [
"jesse-engreitz:230423pPPIFEnformer-Jurkat-Amp_PPIF_promoter-BioRep2-FFrep4-BinA-PCRrep7_I1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI0222FTDC](/sequence-files/IGVFFI0222FTDC/) has in progress subobject auxiliary set [IGVFDS0557FRZM](/auxiliary-sets/IGVFDS0557FRZM/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI0222FTDC/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "dd988040d9c3809fd0e0e682e2a336d7",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-13T16:01:23.891090+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS0557FRZM/",
"file_size": 1688289,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI0222FTDC/@@download/IGVFFI0222FTDC.fastq.gz",
"illumina_read_type": "I1",
"index": "AATGTTCT:TGAC",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 8,
"md5sum": "3c4d156c12f1ceb98dd217604011c34d",
"mean_read_length": 8,
"minimum_read_length": 8,
"read_count": 196655,
"release_timestamp": "2023-12-21T01:16:16.178946+00:00",
"s3_uri": "s3://igvf-files/2023/12/13/a1206fe6-b398-4cdb-a12f-fa98457396bf/IGVFFI0222FTDC.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
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"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "230423pPPIFEnformerJurkat-Jurkat-PE-pPPIF_Enformer-Amp-pPPIF-BioRep2-FFRep4_BinA-PCRrep7_S343_I1_001.fastq.gz",
"summary": "I1 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "a1206fe6-b398-4cdb-a12f-fa98457396bf"
}