{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI0219LPMU/",
"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI0219LPMU",
"aliases": [
"jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinD-PCRrep4_I2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI0219LPMU](/sequence-files/IGVFFI0219LPMU/) has in progress subobject auxiliary set [IGVFDS7701USEL](/auxiliary-sets/IGVFDS7701USEL/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI0219LPMU/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "eef1a21d4733ed1d3d8e7654c9b4c916",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T19:37:02.842169+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS7701USEL/",
"file_size": 865050,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI0219LPMU/@@download/IGVFFI0219LPMU.fastq.gz",
"illumina_read_type": "I2",
"index": "CCTATGCC:CAGT",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 4,
"md5sum": "a3b421450b625ae6b8e6bd6ceae0191f",
"mean_read_length": 4,
"minimum_read_length": 4,
"read_count": 99697,
"release_timestamp": "2023-12-20T23:32:22.250787+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/c732731e-f029-4f38-b65b-608acd9dc2f7/IGVFFI0219LPMU.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinD-PCRrep4_S40_I2_001.fastq.gz",
"summary": "I2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "c732731e-f029-4f38-b65b-608acd9dc2f7"
}