IGVFFI0219BOCG

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3465JQXG(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSite-IndividualVariantExp-AGGT_CAAC-THP1-BioRep2-FFrep1-FACS_Input-PCRrep2_I2
md5sum
d760ee9c869be3de910133898a1794c8
Content MD5sum
36c3d9069abba3840b47e7c60abdf505
File Size
15 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_C11-Amp_PPIF_5splicesite-BioRep2-FFrep1-BinAll-PCRrep2_S985_I2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
I2
Index
CCAGCACC:AGGTGCGT
Average Read Length
8
Read Count
2159567

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution