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INDEXED
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SequenceFile
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IGVFFI0208AMKP
IGVFFI0208AMKP
released
validated
Json view
File Set
IGVFDS9040WICU
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8377
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8377_R2
md5sum
400f773990dbc2d8a99c66c317bb646d
Content MD5sum
c79ef343d371fbc529ae17216002372f
File Size
4.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2257_L4_SS-PKR-607_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8377
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
78228481
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9869JVFX
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 607)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8496ATXD
yaml
seqspec
seqspec of IGVFFI6964MSYU, IGVFFI0208AMKP
Jason Buenrostro, Broad
1.3 KB
validated