Home

IGVFFI0180GVJM

released
validated
File Set
IGVFDS1267CSNQ(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 1390
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1390_R2
buenrostro-bernstein:SS-LS_1390_R2
md5sum
979326ca3a23ad868a5687a190e94287
Content MD5sum
46d7591580391e6f94f2d7e122599f29
File Size
2.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1079_L1_SS-PKR-2_SS-V1-2nd-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1390
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
43122733

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad