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INDEXED
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SequenceFile
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IGVFFI0171YSVN
IGVFFI0171YSVN
released
validated
Json view
File Set
IGVFDS7128QRSY
(untreated ATAC-seq)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-bulk-atac-control-ipsc-cm-rep3-R1
md5sum
b7dc3f74a24cad102d3026e29fc603c2
Content MD5sum
8333bbb01d8ac7fb68f6248032f0631d
File Size
6.1 GB
Submitted File Name
/datacommons/gersbachlab/tda17/Anglen_7276_210923B6/data/atac_seq/processed_raw_reads/Anglen_7276_210923B6/Control_3.R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Charles Gersbach, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
51
Read Count
195755381
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4983MYZQ
InVitroSystem
GM25256 (WTC-11)
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4523VJXB
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
5.0 GB
validated