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INDEXED
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SequenceFile
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IGVFFI0171YSVN
IGVFFI0171YSVN
released
validated
Json view
File Set
IGVFDS7128QRSY
(ATAC-seq)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-bulk-atac-control-ipsc-cm-rep3-R1
md5sum
b7dc3f74a24cad102d3026e29fc603c2
Content MD5sum
8333bbb01d8ac7fb68f6248032f0631d
File Size
6.1 GB
Submitted File Name
/datacommons/gersbachlab/tda17/Anglen_7276_210923B6/data/atac_seq/processed_raw_reads/Anglen_7276_210923B6/Control_3.R1.fastq.gz
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
51
Read Count
195755381
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4983MYZQ
InVitroSystem
GM25256 (WTC-11)
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4523VJXB
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
5.0 GB
validated
Attribution
Award
HG012053
Principal Investigator(s)
Charles Gersbach
,
Gregory Crawford
,
Tim Reddy
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke