IGVFFI0148JRIM

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2561XUTA(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X033_G4_P034_L002_R2

md5sum

d6a5bca96afdb97751d19109e58052aa

Content MD5sum

ad3f407cfd91cf062705fd65639f05e3

File Size

12 GB

Submitted File Name

Multiome_RNA_X033_G4_L004_P034_S20_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

101

Read Count

218381947

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7822WDMB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue; ... and 10 more samples