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INDEXED
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SequenceFile
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IGVFFI0129OQOG
IGVFFI0129OQOG
released
validated
Json view
File Set
IGVFDS9151XHFL
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 5374
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5374_R2
md5sum
187b9bf822ab2cc6682fc169acc8d5b4
Content MD5sum
aba0d93c8fd460a1db1a960e561736e7
File Size
14 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1588_L4_SS-PKR-432_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5374
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
180960125
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1149LLIF
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2261FPNI
yaml
seqspec
seqspec of IGVFFI2352SZMI, IGVFFI0129OQOG
Jason Buenrostro, Broad
1.3 KB
validated