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SequenceFile
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IGVFFI0128XUGL
IGVFFI0128XUGL
released
validated
Json view
File Set
IGVFDS8461GQKB
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4320
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4320_R1
md5sum
56eea1844a37d75c5f848510669fe4e6
Content MD5sum
7842cfbe6ed507ccd062172b9a1e1727
File Size
3.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-535_L1_SS-PKR-170_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4320
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
49236052
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9034PZJY
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 170)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2835WFTO
yaml
seqspec
seqspec of IGVFFI0128XUGL, IGVFFI5219XWVL, IGVFFI0586AEAD
Jason Buenrostro, Broad
1.3 KB
validated