IGVFFI0090ALXV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1977MLOK(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G4_P052_L002_I1

md5sum

4681cc82fb143ae32aff629b8574e382

Content MD5sum

d05bb647c06234663d95e1a1f8395cd6

File Size

252 MB

Submitted File Name

Multiome_RNA_RP001_G4_L004_P052_S4_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

42979932

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7329LEXT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples