IGVFFI0086CBQB

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9453WGVI(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X015_G2_P014_L002_I1

md5sum

058e31f06b3ef0a853033dff445aced0

Content MD5sum

47c53c4bcdec9bd13b083095f08d31f8

File Size

1.6 GB

Submitted File Name

Multiome_RNA_X015_G2_L002_P014_S22_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HTHCCDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

282628880

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7474GXHG

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) posterior cingulate gyrus tissue; Homo sapiens (male, 90 or above years) substantia nigra tissue; ... and 10 more samples