IGVFFI0079ENZP

released
validated
File Set
IGVFDS9970KYUU(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp17_atac_10x1_NGS1_i1
md5sum
b098bb24a8182c13e5cf3ed4ba03a9b1
Content MD5sum
e7fc07551be857cb72755b57657d2f86
File Size
1.6 GB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/igvf17/ATAC/CMAS19_ATAC1_S44_L005_I1_001.fastq.gz
Checkfiles Version

Sequencing Details

Sequencing Platform
Sequencing Run
1
Flowcell ID
22NF33LT3
Lane
5
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I1
Average Read Length
8
Read Count
229012505

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
Multiplexed Samples
multiplexed sample: RUES2 differentiated cell specimen induced to gastrula for 2 days, female, Homo sapiens; RUES2 differentiated cell specimen induced to gastrula for 1 day, female, Homo sapiens; ... and 10 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Ansuman Satpathy, Stanford
5.3 GB
validation exempted

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI9226XSES, IGVFFI8617IQUT, IGVFFI3188FWZL, IGVFFI0079ENZP
Ansuman Satpathy, Stanford
1.4 KB
validated

Attribution

Award
Principal Investigator(s)
Contact P.I.
Lab