IGVFFI0064YQQX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5686RVQL(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP023_G3_P068_L004_I1

md5sum

ff2610aefc546429c87984fa7d2dccbc

Content MD5sum

86ab79cd155c596870b260ed8bd7f0bb

File Size

568 MB

Submitted File Name

Multiome_RNA_RP023_G3_L003_P068_S15_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

2257GYLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

97048513

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4613OXKG

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 52 years) posterior cingulate gyrus tissue; Homo sapiens (male, 87 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples