IGVFFI0057MPDB

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8061INAG(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G3_P054_L008_R2

md5sum

c3b9e08910ca45d1a93af654ac351d23

Content MD5sum

3cb004760932ec31f075cbd0bc6f1d4d

File Size

1.5 GB

Submitted File Name

Multiome_RNA_RP005_G3_L003_P054_S38_L008_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

35955649

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0891NGTB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples