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IGVFFI0052MDWT

released
validated
File Set
IGVFDS4965OCLD(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 7
File Format
fastq
Content Type
reads
md5sum
a556bd4c8e99f4af1a92df2999010cdd
Content MD5sum
782dbea41f2ee0e8c5bd591c61afeaaf
File Size
11 GB
Submitted File Name
igvf_003/nova2/igvf_003_B02_D_nova_N2_L002_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7
Flowcell ID
HJ73MDSX5
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
151420364

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; Mus musculus 129S1J (male, 72 days) left hippocampal formation tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.3 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0052MDWT, IGVFFI9248JGQM
Ali Mortazavi, UCI
1.4 KB
validated