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INDEXED
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SequenceFile
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IGVFFI0045DPKF
IGVFFI0045DPKF
released
validated
Json view
File Set
IGVFDS4736GQFE
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8319
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8319_R2
md5sum
515c47cfa999f673b5cad53d1ebc7829
Content MD5sum
a71c19aea63344b45f7632dba95447be
File Size
5.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2165_L1_SS-PKR-584_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8319
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
89161797
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6228EUYU
Tissue
left cerebral cortex
Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 584)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2725HAQV
yaml
seqspec
seqspec of IGVFFI1240NFHV, IGVFFI0045DPKF
Jason Buenrostro, Broad
1.3 KB
validated