IGVFFI0033YVAS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4233IEWY(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X054_G3_P072_L002_R2

md5sum

8e0541eddf00117a220e3545fa2d25cd

Content MD5sum

75fb2e79c9f9fc22eb91af11cf9b11e8

File Size

12 GB

Submitted File Name

Multiome_RNA_X054_G3_L003_P072_S15_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

173207784

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2747EUIZ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) putamen tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 8 more samples