IGVFFI0029TMZB

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3707VRFM(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G3_P062_L007_I1

md5sum

ed976b3f9d070d7d915e8a21d4cc1f46

Content MD5sum

bfd002eeda12594f9480010915e9de96

File Size

277 MB

Submitted File Name

Multiome_RNA_RP014_G3_L003_P062_S31_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

37886936

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4901QTFI

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples