IGVFFI0027GBBT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6541QHNV(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X027_G8_P028_L004_I1

md5sum

f57499efe6c84aacedc9cb8f32ed101d

Content MD5sum

393ca6d76d4d0f350f18c0bc2cb8612e

File Size

1.2 GB

Submitted File Name

Multiome_RNA_X027_G8_L008_P028_S17_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV737DSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

207594177

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6790VZAC

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 71 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples