IGVFFI0022SYSD

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1275ATQY(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G2_P056_L008_I2

md5sum

ff8013f70e7d6762615b1fca0b97c3b0

Content MD5sum

a1b208c961b64af43c769cfbce945f20

File Size

350 MB

Submitted File Name

Multiome_RNA_RP007_G2_L002_P056_S89_L008_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

53079820

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4037ZUPB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples