{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI0019AJUY/",
"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI0019AJUY",
"aliases": [
"jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinD-PCRrep5_R2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI0019AJUY](/sequence-files/IGVFFI0019AJUY/) has in progress subobject auxiliary set [IGVFDS8926XVHD](/auxiliary-sets/IGVFDS8926XVHD/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI0019AJUY/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "b22380696572b1f9da5841e70d36525c",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T23:51:29.389100+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS8926XVHD/",
"file_size": 3853222,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI0019AJUY/@@download/IGVFFI0019AJUY.fastq.gz",
"illumina_read_type": "R2",
"index": "TGTAACTC:ACTG",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "2d7e1721114987ce422ebd3bbe9459b5",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 102424,
"release_timestamp": "2023-12-21T00:22:04.240896+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/7c904fac-10bd-4391-abc6-f068fe48122c/IGVFFI0019AJUY.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-BinD-PCRrep5_S287_R2_001.fastq.gz",
"summary": "R2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "7c904fac-10bd-4391-abc6-f068fe48122c"
}