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INDEXED
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SequenceFile
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IGVFFI0012ASTT
IGVFFI0012ASTT
released
validated
Json view
File Set
IGVFDS2676HFQT
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9017
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9017_R1
md5sum
412032d3e765d427e035db68f1887d80
Content MD5sum
a542552522a9f9fd2207ecd458c28728
File Size
708 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2271_L7_SS-PKR-173_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9017
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15691587
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7503LASU
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 173)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3105NWFB
yaml
seqspec
seqspec of IGVFFI0012ASTT, IGVFFI8238LQVM, IGVFFI2129GMNW
Jason Buenrostro, Broad
1.3 KB
validated