{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI0008XSRO/",
"@type": [
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"File",
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],
"accession": "IGVFFI0008XSRO",
"aliases": [
"jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinA-PCRrep7_R1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI0008XSRO](/sequence-files/IGVFFI0008XSRO/) has in progress subobject auxiliary set [IGVFDS8184FIIP](/auxiliary-sets/IGVFDS8184FIIP/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI0008XSRO/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "917f275e9136f497722c84d8eaec2e38",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T20:20:19.723693+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS8184FIIP/",
"file_size": 5182505,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI0008XSRO/@@download/IGVFFI0008XSRO.fastq.gz",
"illumina_read_type": "R1",
"index": "AACGCATT:GTCA",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "6d5461d7d287b5b8aa4c2619bc86e2fe",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 165707,
"release_timestamp": "2023-12-20T23:47:51.672989+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/fe447de9-5f45-441e-8892-08ee665dce56/IGVFFI0008XSRO.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinA-PCRrep7_S103_R1_001.fastq.gz",
"summary": "R1 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "fe447de9-5f45-441e-8892-08ee665dce56"
}