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IGVFFI0001VSZG

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7476HGYD(scRNA-seq)
Summary
I2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
harinder-singh:multiplexed_perturbation_scRNAseq_20231117_GEX_NGS_LAF6401A8_L004_I2
md5sum
808bec9991e4403ab9373a777150b9d6
Content MD5sum
839a03891d08fae35722ddc138ad9e22
File Size
889 MB
Submitted File Name
/ix/djishnu/Common_Folder/Pease_Data/20231110_PerturbSeq/2_111723_Hsingh_5Pv2_GEX_LAF6401A8_S24_L004_I2_001.fastq.gz
Checkfiles Version
v17
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I2
Average Read Length
10
Read Count
117889122

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days; ... and 10 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene expression in sparse gene count matrix
Harinder Singh, University of Pittsburgh
835 MB
validated