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INDEXED
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SequenceFile
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IGVFFI0001PUWH
IGVFFI0001PUWH
released
validated
Json view
File Set
IGVFDS5588TNTQ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4344
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4344_R1
md5sum
6911446398393250d2988a4b8bb7e207
Content MD5sum
02f58638824e669e3ffac169ef2d2b47
File Size
3.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-556_L1_SS-PKR-207_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4344
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
47724451
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9122KZMY
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 207)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3229XWTT
yaml
seqspec
seqspec of IGVFFI0001PUWH, IGVFFI9130RWLB, IGVFFI1403ORLE
Jason Buenrostro, Broad
1.3 KB
validated