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INDEXED
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AssayTerm
Assay
Provenance
Quality
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Click and hold a term momentarily to select items
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that term.
Assay Type
All
None
DNA binding
5
3D chromatin structure
2
Massively parallel reporter assay
2
Single cell
2
CRISPR screen
1
DNA accessibility
1
DNA sequencing
1
Transcription
1
Assay Category
All
None
protein and DNA interaction
4
Assay Objective
All
None
protein and DNA interaction identification objective
4
chromosome conformation identification objective
2
25 Items
100 Items
300 Items
22 items
AssayTerm
OBI:0000185
imaging assay
released
AssayTerm
OBI:0002041
self-transcribing active regulatory region sequencing assay
Synonyms
STARR-seq assay, STARR-seq, self-transcribing active regulatory region sequencing
released
AssayTerm
OBI:0002440
Hi-C assay
released
AssayTerm
OBI:0002762
single-nucleus ATAC-seq
Synonyms
snATAC-seq
released
AssayTerm
OBI:0000288
protein-protein interaction detection assay
released
AssayTerm
OBI:0003133
cas mediated mutagenesis
Synonyms
CRISPR/cas mediated mutagenesis, CRISPR mediated mutagenesis
released
AssayTerm
OBI:0003090
bulk RNA-seq assay
released
AssayTerm
OBI:0000716
ChIP-seq assay
Synonyms
chromatin immunoprecipitation sequencing assay
released
AssayTerm
OBI:0003089
bulk assay for transposase-accessible chromatin using sequencing
Synonyms
bulk ATAC-seq
released
AssayTerm
OBI:0003109
single-nucleus RNA sequencing assay
Synonyms
single nuclei RNA sequencing, sNuc-seq, snRNA-seq
released
AssayTerm
OBI:0002631
single-cell RNA sequencing assay
Synonyms
scRNA-seq
released
AssayTerm
OBI:0003302
micro-C assay
released
AssayTerm
OBI:0002019
transcription factor binding site identification by ChIP-Seq assay
Synonyms
TF Binding ChIP-Seq
released
AssayTerm
NTR:0000520
CRISPR screen
released
AssayTerm
OBI:0000916
flow cytometry assay
Synonyms
FACS
released
AssayTerm
NTR:0000764
single-nucleus methylCytosine Transcriptome sequencing
released
AssayTerm
OBI:0000626
DNA sequencing assay
Synonyms
nucleotide sequencing
released
AssayTerm
NTR:0000761
spatial transcriptomics
released
AssayTerm
OBI:0002764
single-cell ATAC-seq
Synonyms
scATAC-seq
released
AssayTerm
OBI:0002675
massively parallel reporter assay
Synonyms
MPRA
released
AssayTerm
OBI:0002458
chromosome conformation capture-on-chip assay
Synonyms
circularized chromosome conformation capture assay, 4C assay
released
AssayTerm
NTR:0000745
single nucleus methylation chromatin conformation capture seq
released