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File Format

Principal Dimension

Secondary Dimensions

Status
released
65 items
  • MatrixFile
    IGVFFI5731ZKRJ
    tar - cell by gene in sparse gene count matrix
    Jay Shendure, UW
    Content Summary
    cell by gene in sparse gene count matrix
    File Set
    scCRISPR activation screen: differential gene expression quantifications, sparse gene count matrix
    released
    validated
  • MatrixFile
    IGVFFI4035YXBX
    mcool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI2561CRHD
    h5ad - cell by gene in sparse gene count matrix
    Ali Mortazavi, UCI
    Content Summary
    cell by gene in sparse gene count matrix
    File Set
    Parse SPLiT-seq: sparse gene count matrix
    released
    validated
  • MatrixFile
    IGVFFI2160BPKW
    cool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI9496UPFJ
    tar - gene by gene expression by CRISPR guide capture in filtered feature barcode matrix
    Charles Gersbach, Duke
    Content Summary
    gene by gene expression by CRISPR guide capture in filtered feature barcode matrix
    File Set
    activation Perturb-seq: filtered feature barcode matrix
    released
    validated
  • MatrixFile
    IGVFFI6124CLAF
    tar - gene by gene expression by CRISPR guide capture in filtered feature barcode matrix
    Charles Gersbach, Duke
    Content Summary
    gene by gene expression by CRISPR guide capture in filtered feature barcode matrix
    File Set
    activation Perturb-seq: filtered feature barcode matrix
    released
    validated
  • MatrixFile
    IGVFFI8842WHFD
    tar - cell by gene in sparse gene count matrix
    Ali Mortazavi, UCI
    Content Summary
    cell by gene in sparse gene count matrix
    File Set
    Parse SPLiT-seq: sparse gene count matrix
    released
    validated
  • MatrixFile
    IGVFFI4765CAWH
    cool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI3187CILT
    tar - gene by gene expression by CRISPR guide capture in filtered feature barcode matrix
    Charles Gersbach, Duke
    Content Summary
    gene by gene expression by CRISPR guide capture in filtered feature barcode matrix
    File Set
    activation Perturb-seq: filtered feature barcode matrix
    released
    validated
  • MatrixFile
    IGVFFI2076THHW
    cool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI7542XIIC
    mcool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI5605EVDS
    mcool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI5241SJON
    mcool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI0296HFSP
    tar - gene by gene expression by CRISPR guide capture in filtered feature barcode matrix
    Charles Gersbach, Duke
    Content Summary
    gene by gene expression by CRISPR guide capture in filtered feature barcode matrix
    File Set
    interference Perturb-seq: filtered feature barcode matrix
    released
    validated
  • MatrixFile
    IGVFFI6024SAQN
    cool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI8148OTHG
    cool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI3234DYPN
    mcool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI3686NNKA
    tar - cell by gene in sparse gene count matrix
    Ali Mortazavi, UCI
    Content Summary
    cell by gene in sparse gene count matrix
    File Set
    Parse SPLiT-seq: sparse gene count matrix
    released
    validated
  • MatrixFile
    IGVFFI1929FNEJ
    mcool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI5479PYGH
    cool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI6805YYEI
    cool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI1509VTYC
    cool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI6961QLQQ
    mcool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI3162UQBM
    cool - genomic position by genomic position in contact matrix
    Charles Gersbach, Duke
    Content Summary
    genomic position by genomic position in contact matrix
    File Set
    HiCAR: contact matrix
    released
    validated
  • MatrixFile
    IGVFFI6619VWBZ
    tar - cell by gene in sparse gene count matrix
    Ali Mortazavi, UCI
    Content Summary
    cell by gene in sparse gene count matrix
    File Set
    Parse SPLiT-seq: sparse gene count matrix
    released
    validated