interference single-nucleus ATAC-seq (10x multiome with MULTI-seq)
Ansuman Satpathy, Stanford
Sample Summary
multiplexed sample: Homo sapiens (male) Jurkat cell line treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; Homo sapiens (female) K562 cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
released
No limitations
AuxiliarySet
IGVFDS6521MNHG
lipid-conjugated oligo sequencing
Ansuman Satpathy, Stanford
Summary
lipid-conjugated oligo sequencing for interference single-nucleus ATAC-seq (10x multiome with MULTI-seq), interference single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
released
No limitations
MeasurementSet
IGVFDS9139TBCB
interference single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
Ansuman Satpathy, Stanford
Sample Summary
multiplexed sample: Homo sapiens (male) Jurkat cell line treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; Homo sapiens (female) K562 cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
released
No limitations
intermediate
AnalysisSet
IGVFDS9664YLAD
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
Ansuman Satpathy, Stanford
Samples
Homo sapiens multiplexed sample of Jurkat, K562, THP-1, TeloHAEC, stimulated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours, modified with CRISPRi Sp-dCas9-KOX1-KRAB