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File Set Type

samples.@id
/in-vitro-systems/IGVFSM9913PXTT/
3 items
  • MeasurementSet
    IGVFDS0272VVTX
    scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
    Jay Shendure, UW
    Sample Summary
    GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane2), male, Homo sapiens modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library
    released
  • principal
    AnalysisSet
    IGVFDS4021XJLW
    scCRISPR activation screen: differential gene expression quantifications, sparse gene count matrix
    Jay Shendure, UW
    Samples
    GM25256 (WTC-11) differentiated cell specimen induced to neuron, at 1 time point(s) post change, modified with CRISPR modifications, transfected with a guide library
    released
  • AuxiliarySet
    IGVFDS2220HHTN
    gRNA sequencing
    Jay Shendure, UW
    Summary
    gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
    released