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samples.@id
/in-vitro-systems/IGVFSM9390JSDH/
3 items
  • MeasurementSet
    IGVFDS8535CXVX
    scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
    Jay Shendure, UW
    Sample Summary
    Homo sapiens (female) K562 cell line (cellular sub pool: 10Xlane2) modified with CRISPRa Sp-dCas9-VP64, transfected with a guide library
    released
  • principal
    AnalysisSet
    IGVFDS9078ZWQH
    scCRISPR activation screen: differential gene expression quantifications, filtered feature barcode matrix
    Jay Shendure, UW
    Samples
    Homo sapiens K562 cell line, modified with CRISPRa Sp-dCas9-VP64, CRISPRa Sp-dCas9-VP64-p65-Rta (VPR), transfected with a guide library
    released
  • AuxiliarySet
    IGVFDS8929VNCP
    gRNA sequencing
    Jay Shendure, UW
    Summary
    gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
    released