gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
preview
AuxiliarySet
IGVFDS3465KEWH
cell hashing barcode sequencing
Gary Hon, UT
Summary
cell hashing barcode sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
preview
MeasurementSet
IGVFDS5429CXNB
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Gary Hon, UT
Sample Summary
Homo sapiens (male) GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW286) modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library
preview
principal
AnalysisSet
IGVFDS7340YDHF
interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression
Gary Hon, UT
Samples
Homo sapiens GM25256 (WTC-11) cell line, modified with CRISPRi Sp-dCas9, transfected with a guide library